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3by Betancur-R, Ricardo Wiley, Edward O Arratia, Gloria Acero, Arturo Bailly, Nicolas Miya, Masaki Lecointre, Guillaume Ortí, Guillermo Published in BMC evolutionary biology (06.07.2017)“...Fish classifications, as those of most other taxonomic groups, are being transformed drastically as new molecular phylogenies provide support for natural...”
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4by Pyron, R Alexander Burbrink, Frank T Wiens, John J Published in BMC evolutionary biology (29.04.2013)“...The extant squamates (>9400 known species of lizards and snakes) are one of the most diverse and conspicuous radiations of terrestrial vertebrates, but no...”
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5“...Reconstructing phylogenies through Bayesian methods has many benefits, which include providing a mathematically sound framework, providing realistic estimates...”
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6by Lanfear, Robert Calcott, Brett Kainer, David Mayer, Christoph Stamatakis, Alexandros Published in BMC evolutionary biology (17.04.2014)“...Partitioning involves estimating independent models of molecular evolution for different subsets of sites in a sequence alignment, and has been shown to...”
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7by Ruhfel, Brad R Gitzendanner, Matthew A Soltis, Pamela S Soltis, Douglas E Burleigh, J Gordon Published in BMC evolutionary biology (17.02.2014)“...Next-generation sequencing has provided a wealth of plastid genome sequence data from an increasingly diverse set of green plants (Viridiplantae). Although...”
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8“...Species are considered the fundamental unit in many ecological and evolutionary analyses, yet accurate, complete, accessible taxonomic frameworks with which to...”
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9by Särkinen, Tiina Bohs, Lynn Olmstead, Richard G Knapp, Sandra Published in BMC evolutionary biology (30.09.2013)“...The Solanaceae is a plant family of great economic importance. Despite a wealth of phylogenetic work on individual clades and a deep knowledge of particular...”
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10“...The evolutionary analysis of molecular sequence variation is a statistical enterprise. This is reflected in the increased use of probabilistic models for...”
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11by Aspeborg, Henrik Coutinho, Pedro M Wang, Yang Brumer, 3rd, Harry Henrissat, Bernard Published in BMC evolutionary biology (20.09.2012)“...The large Glycoside Hydrolase family 5 (GH5) groups together a wide range of enzymes acting on β-linked oligo- and polysaccharides, and glycoconjugates from a...”
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12“...The quality of multiple sequence alignments plays an important role in the accuracy of phylogenetic inference. It has been shown that removing ambiguously...”
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13by Fabre, Pierre-Henri Hautier, Lionel Dimitrov, Dimitar Douzery, Emmanuel J P Published in BMC evolutionary biology (14.06.2012)“...Development of phylogenetic methods that do not rely on fossils for the study of evolutionary processes through time have revolutionized the field of...”
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14by Carranza-Rojas, Jose Goeau, Herve Bonnet, Pierre Mata-Montero, Erick Joly, Alexis Published in BMC evolutionary biology (11.08.2017)“...Hundreds of herbarium collections have accumulated a valuable heritage and knowledge of plants over several centuries. Recent initiatives started ambitious...”
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15by Huang, Hui Shi, Chao Liu, Yuan Mao, Shu-Yan Gao, Li-Zhi Published in BMC evolutionary biology (07.07.2014)“...Camellia is an economically and phylogenetically important genus in the family Theaceae. Owing to numerous hybridization and polyploidization, it is...”
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16by Dereeper, Alexis Audic, Stephane Claverie, Jean-Michel Blanc, Guillaume Published in BMC evolutionary biology (12.01.2010)“...The right sampling of homologous sequences for phylogenetic or molecular evolution analyses is a crucial step, the quality of which can have a significant...”
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17“...Several phylogenetic approaches have been developed to estimate species trees from collections of gene trees. However, maximum likelihood approaches for...”
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18by Blaimer, Bonnie B Brady, Seán G Schultz, Ted R Lloyd, Michael W Fisher, Brian L Ward, Philip S Published in BMC evolutionary biology (04.12.2015)“...Ultraconserved elements (UCEs) have been successfully used in phylogenomics for a variety of taxa, but their power in phylogenetic inference has yet to be...”
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19by Hsiang, Allison Y Field, Daniel J Webster, Timothy H Behlke, Adam D B Davis, Matthew B Racicot, Rachel A Gauthier, Jacques A Published in BMC evolutionary biology (20.05.2015)“...The highly derived morphology and astounding diversity of snakes has long inspired debate regarding the ecological and evolutionary origin of both the snake...”
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20by Oliveira, Claudio Avelino, Gleisy S Abe, Kelly T Mariguela, Tatiane C Benine, Ricardo C Ortí, Guillermo Vari, Richard P Corrêa e Castro, Ricardo M Published in BMC evolutionary biology (26.09.2011)“...With nearly 1,100 species, the fish family Characidae represents more than half of the species of Characiformes, and is a key component of Neotropical...”