Search Results - "Bakker, Matthew"

Journal Article

Plant community richness and microbial interactions structure bacterial communities in soil

by Schlatter, Daniel C Bakker, Matthew G Bradeen, James M Kinkel, Linda L Published in Ecology (Durham) (01.01.2015)

“...Plant species, plant community diversity and microbial interactions can significantly impact soil microbial communities, yet there are few data on the...”

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Journal Article

A fungal mock community control for amplicon sequencing experiments

by Bakker, Matthew G Published in Molecular ecology resources (01.05.2018)

“...Microbial ecology has been profoundly advanced by the ability to profile complex microbial communities by sequencing of marker genes amplified from...”

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Journal Article

Harnessing the rhizosphere microbiome through plant breeding and agricultural management

by Matthew G. Bakker Daniel K. Manter Amy M. Sheflin Tiffany L. Weir Jorge M. Vivanco Published in Plant and soil (01.01.2012)

“...Background The need to enhance the sustainability of intensive agricultural systems is widely recognized One promising approach is to encourage beneficial...”

Journal Article

Impacts of bulk soil microbial community structure on rhizosphere microbiomes of Zea mays

by Matthew G. Bakker Jacqueline M. Chaparro Daniel K. Manter Jorge M. Vivanco
edited by Yao, Huaiying Zhu, Yongguan
Published in Plant and soil (01.07.2015)

“...Background and aims It has frequently been shown that plants interact with soils to shape rhizosphere microbiomes. However, previous work has not distinguished...”

Journal Article

A coevolutionary framework for managing disease-suppressive soils

by Kinkel, Linda L Bakker, Matthew G Schlatter, Daniel C Published in Annual review of phytopathology (2011-00-00)

“...This review explores a coevolutionary framework for the study and management of disease-suppressive soil microbial communities. Because antagonistic microbial...”

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Journal Article

Plant monocultures produce more antagonistic soil Streptomyces communities than high-diversity plant communities

by Bakker, Matthew G Otto-Hanson, Lindsey Lange, A.J Bradeen, James M Kinkel, Linda L Published in Soil biology & biochemistry (01.10.2013)

“...Plant–soil feedbacks are important to productivity and plant community dynamics in both natural and managed ecosystems. Among soil bacteria, the Streptomyces...”

Journal Article

Variations in Diversity and Richness of Gut Bacterial Communities of Termites (Reticulitermes flavipes) Fed with Grassy and Woody Plant Substrates

by Xing-Feng Huang Matthew G. Bakker Timothy M. Judd Kenneth F. Reardon Jorge M. Vivanco Published in Microbial ecology (01.04.2013)

“...Diets shape the animal gut microbiota, although the relationships between diets and the structure of the gut microbial community are not yet well understood...”

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Journal Article

Bacterial endophyte antagonism toward a fungal pathogen in vitro does not predict protection in live plant tissue

by Whitaker, Briana K Bakker, Matthew G Published in FEMS microbiology ecology (01.02.2019)

“...ABSTRACT Endophytic microbiota are potentially useful plant symbionts for conferring biotic or abiotic stress tolerance. Common approaches to identify...”

Journal Article

Diffuse symbioses: roles of plant–plant, plant–microbe and microbe–microbe interactions in structuring the soil microbiome

by Bakker, Matthew G Schlatter, Daniel C Otto‐Hanson, Lindsey Kinkel, Linda L Published in Molecular ecology (01.03.2014)

“...A conceptual model emphasizing direct host–microbe interactions has dominated work on host‐associated microbiomes. To understand plant–microbiome associations,...”

Journal Article

Potential impact of soil microbiomes on the leaf metabolome and on herbivore feeding behavior

by Dayakar V. Badri Gaston Zolla Matthew G. Bakker Daniel K. Manter Jorge M. Vivanco Published in The New phytologist (01.04.2013)

“...It is known that environmental factors can affect the biosynthesis of leaf metabolites. Similarly, specific pairwise plant–microbe interactions modulate the...”

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Journal Article

Managing for Multifunctionality in Perennial Grain Crops

by Ryan, Matthew R Crews, Timothy E Culman, Steven W DeHaan, Lee R Hayes, Richard C Jungers, Jacob M Bakker, Matthew G Published in Bioscience (01.04.2018)

“...Abstract Plant breeders are increasing yields and improving agronomic traits in several perennial grain crops, the first of which is now being incorporated...”

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Journal Article

Genetic elucidation of interconnected antibiotic pathways mediating maize innate immunity

by Ding, Yezhang Weckwerth, Philipp R Poretsky, Elly Murphy, Katherine M Sims, James Saldivar, Evan Christensen, Shawn A Char, Si Nian Yang, Bing Tong, Anh-Dao Shen, Zhouxin Kremling, Karl A Buckler, Edward S Kono, Tom Nelson, David R Bohlmann, Jörg Bakker, Matthew G Vaughan, Martha M Khalil, Ahmed S Betsiashvili, Mariam Dressano, Keini Köllner, Tobias G Briggs, Steven P Zerbe, Philipp Schmelz, Eric A Huffaker, Alisa Published in Nature plants (01.11.2020)

“...Specialized metabolites constitute key layers of immunity that underlie disease resistance in crops; however, challenges in resolving pathways limit our...”

Journal Article

Effects of plant host species and plant community richness on streptomycete community structure

by Bakker, Matthew G Bradeen, James M Kinkel, Linda L Published in FEMS microbiology ecology (01.03.2013)

“...Abstract We investigated soil streptomycete communities associated with four host plant species (two warm season C4 grasses: Andropogon gerardii,Schizachyrium...”

Journal Article

Landscape Based Agricultural Water Demand Modeling—A Tool for Water Management Decision Making in British Columbia, Canada

by Neilsen, Denise Bakker, Matthew Van der Gulik, Ted Smith, Scott Cannon, Alex Losso, Istvan Warwick Sears, Anna Published in Frontiers in environmental science (03.08.2018)

“...Regional water managers face challenges managing water demand and supply in response to climate change. In British Columbia (BC), < 5% of the total land...”

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Journal Article

Bulk soil bacterial community structure and function respond to long-term organic and conventional agricultural management

by Bakker, Matthew G Looft, Torey Alt, David P Delate, Kathleen Cambardella, Cynthia A Published in Canadian journal of microbiology (20180000)

“...Understanding how soil microbiomes respond to management is essential to maximizing soil health. We contrasted microbiomes in bulk soil under long-term organic...”

Journal Article

Effects of cover crop presence, cover crop species selection and fungicide seed treatment on corn seedling growth

by Schenck, Lara A Bakker, Matthew G Moorman, Thomas B Kaspar, Thomas C Published in Renewable agriculture and food systems (01.04.2019)

“...Cover crops can offer erosion protection as well as soil and environmental quality benefits. Cereal rye (Secale cereale L.) is the most commonly used winter...”

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Journal Article

Effects of fungicide seed treatments and a winter cereal rye cover crop in no till on the seedling disease complex in corn

by Acharya, Jyotsna Bakker, Matthew G Moorman, Thomas B Kaspar, Thomas C Lenssen, Andrew W Robertson, Alison E Published in Canadian journal of plant pathology (02.10.2018)

“...Corn seed is treated with various fungicide active ingredients that target several fungal and oomycete genera in the corn seedling disease complex. In this...”

Journal Article

Root exudation of phytochemicals in Arabidopsis follows specific patterns that are developmentally programmed and correlate with soil microbial functions

by Chaparro, Jacqueline M Badri, Dayakar V Bakker, Matthew G Sugiyama, Akifumi Manter, Daniel K Vivanco, Jorge M
edited by Wu, Keqiang
Published in PloS one (2013-00-00)

“...Plant roots constantly secrete compounds into the soil to interact with neighboring organisms presumably to gain certain functional advantages at different...”

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Journal Article

Fusarium mycotoxins: a trans-disciplinary overview

by Bakker, Matthew G Brown, Daren W Kelly, Amy C Kim, Hye-Seon Kurtzman, Cletus P Mccormick, Susan P O'Donnell, Kerry L Proctor, Robert H Vaughan, Martha M Ward, Todd J Published in Canadian journal of plant pathology (03.04.2018)

“...Due to health risks and economic losses associated with mycotoxins produced by Fusarium species, there is a compelling need for an improved understanding of...”

Journal Article

Isolation of cultivation-resistant oomycetes, first detected as amplicon sequences, from roots of herbicide-terminated winter rye

by Bakker, Matthew G Moorman, Thomas B Kaspar, Thomas C Manter, Daniel K Published in Phytobiomes journal (01.01.2017)

“...The dynamics of microbial communities associated with dying cover crops are of interest because of potential impacts on disease in a subsequent crop, and...”

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