Formation of Chromosomal Domains by Loop Extrusion

by Fudenberg, Geoffrey   Imakaev, Maxim   Lu, Carolyn   Goloborodko, Anton   Abdennur, Nezar   Mirny, Leonid A Published in Cell reports (Cambridge) (31.05.2016)

Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas

by Liu, Yuexin   Kim, Pora   Zhang, Shaojun   Weinstein, John N   Laird, Peter W   Hutter, Carolyn M   Liu, Jia   Heiman, David I   Saksena, Gordon   Voet, Doug   Dhankani, Varsha   Weinstein, John N   Chatila, Walid K   Ladanyi, Marc   Sander, Chris   Taylor, Barry S   Anur, Pavana   Yau, Christina   Ally, Adrian   Kasaian, Katayoon   Ma, Yussanne   Cherniack, Andrew D   Gabriel, Stacey B   Gao, Galen F   Shih, Juliann   Simons, Janae V   Drummond, Jennifer   Hale, Walker   Korchina, Viktoriya   Morton, Donna   Sheth, Margi   Wang, Linghua   Kandoth, Cyriac   Lau, Kevin   Thompson, Eric   Huntsman, David   Horowitz, Neil   Fulop, Jordonna   Tucker, Kelinda   Zelinka, Tomas   Iacocca, Mary   Sepulveda, Antonia   Roman-Roman, Sergio   Stern, Marc-Henri   Lipp, Eric   Delman, Keith   Gillis, Ad   Korpershoek, Esther   Looijenga, Leendert   Perin, Alessandro   Stoehr, Christine   Stoehr, Robert   Wach, Sven   Kycler, Witold   Chung, Ki   Martin, Julie   Bubley, Glenn   De Rienzo, Assunta   Campo, Elias   Evason, Kimberley   Borad, Mitesh   Kocher, Jean-Pierre   Petersen, Gloria   Que, Florencia   Ajani, Jaffer A   Esmaeli, Bita   Logothetis, Christopher   Sood, Anil   Mann, Graham   Gopalan, Anuradha   Pinto, Peter A   Vocke, Cathy D   Yang, Hannah   Caraman, Irina   Mura, Sergiu   Stancul, Irina   Albert, Monique   Arnaout, Angel   Barnett, Gene   Farver, Carol   Raymond, Daniel   Dinkin, Mikhail   Kumar, Bahavna   Grizzle, William E   Sexton, Katherine C   Fassnacht, Martin   Tennstedt, Pierre   Carroll, Peter R   Kendler, Ady   Steele, Ruth   Campos, Benito   Giordano, Thomas   Mes-Masson, Anne-Marie   Moxley, Katherine   Pinero, Edna M. Mora   Godwin, Eryn M   Carey, Thomas   Wolf, Gregory   Ley, Timothy   Rubin, Mark A Published in Cell reports (Cambridge) (03.04.2018)

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

by Ricketts, Christopher J   Reznik, Ed   Kanchi, Rupa S   Merino, Maria J   Signoretti, Sabina   Srinivasan, Ramaprasad   Yang, Lixing   Robertson, A. Gordon   Demchok, John A   Zhang, Jiashan (Julia)   Wu, Ye   Liu, Yuexin   Lu, Yiling   Weinstein, John N   Zhang, Jiexin   Gross, Benjamin E   Kundra, Ritika   Nissan, Moriah G   Phillips, Sarah M   Zhang, Hongxin   Peto, Myron   Jones, Steven J.M   Bodenheimer, Tom   Hoyle, Alan P   Veluvolu, Umadevi   Fan, Huihui   Bellair, Michelle   Dinh, Huyen   Doddapaneni, HarshaVardhan   Han, Yi   Lee, Sandra   Li, Wei   Le, Xuan   Thorp, Richard   Lyadov, Vladimir   De Rose, Agostino   Rabeno, Brenda   Têtu, Bernard   Chabot, John   Hibshoosh, Hanina   Potapova, Olga   Mariani, Odette   Bigner, Darell   Brat, Daniel J   Van Meir, Erwin G   Stoop, Hans   van Kessel, Kim E   Cuppini, Lucia   Finocchiaro, Gaetano   Murawa, Dawid   Richards, William G   Guillermo, Armando López   Van Bang, Nguyen   Dottino, Peter R   Akeredolu, Teniola   Birrer, Michael   Nagorney, David   Stanton, Melissa   Yang, Ju Dong   Bondaruk, Jolanta   Broaddus, Russell   Guo, Charles   Meric-Bernstam, Funda   Tsao, Anne   Carter, Candace   Haydu, Lauren   Hersey, Peter   Spillane, Andrew   Synott, Maria   Drwiega, Paul   Hung, Nguyen Phi   Kebebew, Electron   Schmidt, Laura S   Cernat, Mircea   Gorincioi, Ghenadie   Tamakawa, Raina   Chevalier, Simone   McKercher, Ginette   Smolenski, Kathy   Alvaro, Domenico   Bragazzi, Maria Consiglia   Cardinale, Vincenzo   Chesla, David   Cottingham, Sandra   Powers, James   Huland, Hartwig   Sauter, Guido   Forgie, Ian   Carney, Michael   Knutson, Tina   Boussioutas, Alex   Saad, Fred   Bocklage, Therese   Feldman, Michael   Valdivieso, Federico   Dhir, Rajiv   Sankarankuty, Ajith   Fong, Kwun M   Fantacone-Campbell, J. Leigh   Spellman, Paul T Published in Cell reports (Cambridge) (03.04.2018)

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

by Giannakis, Marios   Mu, Xinmeng Jasmine   Shukla, Sachet A   Qian, Zhi Rong   Cohen, Ofir   Nishihara, Reiko   Bahl, Samira   Cao, Yin   Amin-Mansour, Ali   Yamauchi, Mai   Sukawa, Yasutaka   Stewart, Chip   Rosenberg, Mara   Mima, Kosuke   Inamura, Kentaro   Nosho, Katsuhiko   Nowak, Jonathan A   Lawrence, Michael S   Giovannucci, Edward L   Chan, Andrew T   Ng, Kimmie   Meyerhardt, Jeffrey A   Van Allen, Eliezer M   Getz, Gad   Gabriel, Stacey B   Lander, Eric S   Wu, Catherine J   Fuchs, Charles S   Ogino, Shuji   Garraway, Levi A Published in Cell reports (Cambridge) (26.04.2016)

A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia

by Tzelepis, Konstantinos   Koike-Yusa, Hiroko   De Braekeleer, Etienne   Li, Yilong   Metzakopian, Emmanouil   Dovey, Oliver M   Mupo, Annalisa   Grinkevich, Vera   Li, Meng   Mazan, Milena   Gozdecka, Malgorzata   Ohnishi, Shuhei   Cooper, Jonathan   Patel, Miten   McKerrell, Thomas   Chen, Bin   Domingues, Ana Filipa   Gallipoli, Paolo   Teichmann, Sarah   Ponstingl, Hannes   McDermott, Ultan   Saez-Rodriguez, Julio   Huntly, Brian J.P   Iorio, Francesco   Pina, Cristina   Vassiliou, George S   Yusa, Kosuke Published in Cell reports (Cambridge) (18.10.2016)

Genomic Correlates of Immune-Cell Infiltrates in Colorectal Carcinoma

by Giannakis, Marios   Mu, Xinmeng Jasmine   Shukla, Sachet A   Qian, Zhi Rong   Cohen, Ofir   Nishihara, Reiko   Bahl, Samira   Cao, Yin   Amin-Mansour, Ali   Yamauchi, Mai   Sukawa, Yasutaka   Stewart, Chip   Rosenberg, Mara   Mima, Kosuke   Inamura, Kentaro   Nosho, Katsuhiko   Nowak, Jonathan A   Lawrence, Michael S   Giovannucci, Edward L   Chan, Andrew T   Ng, Kimmie   Meyerhardt, Jeffrey A   Van Allen, Eliezer M   Getz, Gad   Gabriel, Stacey B   Lander, Eric S   Wu, Catherine J   Fuchs, Charles S   Ogino, Shuji   Garraway, Levi A Published in Cell reports (Cambridge) (26.04.2016)

A Tissue-Mapped Axolotl De Novo Transcriptome Enables Identification of Limb Regeneration Factors

by Bryant, Donald M   Johnson, Kimberly   DiTommaso, Tia   Tickle, Timothy   Couger, Matthew Brian   Payzin-Dogru, Duygu   Lee, Tae J   Leigh, Nicholas D   Kuo, Tzu-Hsing   Davis, Francis G   Bateman, Joel   Bryant, Sevara   Guzikowski, Anna R   Tsai, Stephanie L   Coyne, Steven   Ye, William W   Freeman, Robert M   Peshkin, Leonid   Tabin, Clifford J   Regev, Aviv   Haas, Brian J   Whited, Jessica L Published in Cell reports (Cambridge) (17.01.2017)

Phenotypic Diversity and Plasticity in Circulating Neutrophil Subpopulations in Cancer

by Sagiv, Jitka Y   Michaeli, Janna   Assi, Simaan   Mishalian, Inbal   Kisos, Hen   Levy, Liran   Damti, Pazzit   Lumbroso, Delphine   Polyansky, Lola   Sionov, Ronit V   Ariel, Amiram   Hovav, Avi-Hai   Henke, Erik   Fridlender, Zvi G   Granot, Zvi Published in Cell reports (Cambridge) (03.02.2015)

A GAL4-Driver Line Resource for Drosophila Neurobiology

by Jenett, Arnim   Rubin, Gerald M   Ngo, Teri-T.B   Shepherd, David   Murphy, Christine   Dionne, Heather   Pfeiffer, Barret D   Cavallaro, Amanda   Hall, Donald   Jeter, Jennifer   Iyer, Nirmala   Fetter, Dona   Hausenfluck, Joanna H   Peng, Hanchuan   Trautman, Eric T   Svirskas, Robert R   Myers, Eugene W   Iwinski, Zbigniew R   Aso, Yoshinori   DePasquale, Gina M   Enos, Adrianne   Hulamm, Phuson   Lam, Shing Chun Benny   Li, Hsing-Hsi   Laverty, Todd R   Long, Fuhui   Qu, Lei   Murphy, Sean D   Rokicki, Konrad   Safford, Todd   Shaw, Kshiti   Simpson, Julie H   Sowell, Allison   Tae, Susana   Yu, Yang   Zugates, Christopher T Published in Cell reports (Cambridge) (25.10.2012)

Principles of Long Noncoding RNA Evolution Derived from Direct Comparison of Transcriptomes in 17 Species

by Hezroni, Hadas   Koppstein, David   Schwartz, Matthew G   Avrutin, Alexandra   Bartel, David P   Ulitsky, Igor Published in Cell reports (Cambridge) (19.05.2015)